Bio2BEL FlyBase¶
A Bio2BEL package for FlyBase.
Manager for FlyBase.
-
class
bio2bel_flybase.manager.
Manager
(*args, **kwargs)[source]¶ Drosophila gene nomenclature and orthologies.
-
namespace_model
¶ alias of
bio2bel_flybase.models.FlyGene
-
FlyBase database models.
bio2bel_flybase¶
Default connection at sqlite:////home/docs/.bio2bel/bio2bel.db
using Bio2BEL v0.2.1
bio2bel_flybase [OPTIONS] COMMAND [ARGS]...
Options
-
-c
,
--connection
<connection>
¶ Defaults to sqlite:////home/docs/.bio2bel/bio2bel.db
belns¶
Manage BEL namespace.
bio2bel_flybase belns [OPTIONS] COMMAND [ARGS]...
drop¶
Drop the database.
bio2bel_flybase drop [OPTIONS]
Options
-
--yes
¶
Confirm the action without prompting.